Conference on Atomistic Simulations of Biomolecules: towards a Quantitative Understanding of Life Machinery
Sprache des Tagungstitel:
Englisch
Original Kurzfassung:
Proton diffusion along biological membranes is vitally important for cellular energetics. The
diffusivity of the interfacial proton is almost as large as that in bulk water (1). Protons migrate without significant contributions from jumps between ionizable groups on the membrane surface (2). The presence of structured water at the boundary of a hydrophobic phase appears to be sufficient (3). This observation seems to be at odds with the substantial Gibbs activation energy barrier ?G?r that must oppose proton release from the membrane in order for long range interfacial diffusion to occur. Here we determined ?G?r from Arrhenius plots of (i) protons? surface diffusion constant and (ii) the rate coefficient for proton surface-to-bulk release. Therefore we photo-released protons from a membrane patch at different temperatures and monitored their arrival at a distant patch. The results disproved that
quasi-equilibrium exists between protons in the
near-membrane layers and in the aqueous bulk. Instead, non-equilibrium kinetics is consistent with this experiment. ?G?r only contains a minor
enthalpic contribution that roughly corresponds to the breakage of a single hydrogen bond. Conceivably, its dominating entropic component
originates from the hydrogen bond orientation of
surface water molecules that strongly favors proton
movement towards the membrane, as indicated by ab initio molecular dynamics simulations. The simulations mirrored the large in vitro ?G?r, and they revealed a back-and-forth shuffling of the excess proton between the proximity of the phosphate groups and the interfacial water layers, which suggests high proton mobility. Taken together, this work reconciles the delayed proton surface-to-bulk release with protons weak bonding to surface water molecules.* No room for citations.
Sprache der Kurzfassung:
Englisch
Vortragstyp:
Hauptvortrag / Eingeladener Vortrag auf einer Tagung
Forschungs-